Spa_g23793


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g23793

Target Alias Description ECC score Gene Family Method Actions
Adi_g005647 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g018038 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034956 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g042910 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g083315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g03878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30533 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g67878 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene32466.t1 Aspi01Gene32466 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s1395.g102559 No alias not classified & original description: CDS=1-912 0.1 OrthoFinder output from all 47 species
Azfi_s3922.g117339 No alias not classified & original description: CDS=1-831 0.1 OrthoFinder output from all 47 species
Cba_g20185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G124700.1 Ceric.01G124700 not classified & original description: pacid=50591887... 0.06 OrthoFinder output from all 47 species
Ceric.02G028200.1 OTP84, Ceric.02G028200 not classified & original description: pacid=50583866... 0.07 OrthoFinder output from all 47 species
Ceric.02G047700.1 Ceric.02G047700 not classified & original description: pacid=50586056... 0.06 OrthoFinder output from all 47 species
Ceric.03G039400.1 Ceric.03G039400 not classified & original description: pacid=50571919... 0.08 OrthoFinder output from all 47 species
Ceric.04G059000.1 Ceric.04G059000 not classified & original description: pacid=50632212... 0.06 OrthoFinder output from all 47 species
Ceric.07G053200.1 Ceric.07G053200 not classified & original description: pacid=50626825... 0.05 OrthoFinder output from all 47 species
Ceric.10G077700.1 Ceric.10G077700 not classified & original description: pacid=50611965... 0.06 OrthoFinder output from all 47 species
Ceric.13G013300.1 Ceric.13G013300 not classified & original description: pacid=50635860... 0.04 OrthoFinder output from all 47 species
Ceric.13G019600.1 Ceric.13G019600 not classified & original description: pacid=50636734... 0.04 OrthoFinder output from all 47 species
Ceric.14G094700.1 EMB2758, Ceric.14G094700 not classified & original description: pacid=50634278... 0.06 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.05 OrthoFinder output from all 47 species
Ceric.16G047600.1 Ceric.16G047600 not classified & original description: pacid=50589369... 0.05 OrthoFinder output from all 47 species
Ceric.18G001000.1 Ceric.18G001000 not classified & original description: pacid=50621627... 0.08 OrthoFinder output from all 47 species
Ceric.19G051600.1 EMB2261, Ceric.19G051600 not classified & original description: pacid=50576223... 0.07 OrthoFinder output from all 47 species
Ceric.19G076600.1 Ceric.19G076600 not classified & original description: pacid=50576300... 0.04 OrthoFinder output from all 47 species
Ceric.20G006900.1 Ceric.20G006900 not classified & original description: pacid=50565918... 0.05 OrthoFinder output from all 47 species
Ceric.31G032600.1 CRR22, Ceric.31G032600 not classified & original description: pacid=50574071... 0.06 OrthoFinder output from all 47 species
Ceric.31G059600.1 Ceric.31G059600 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.34G070200.1 Ceric.34G070200 not classified & original description: pacid=50624170... 0.04 OrthoFinder output from all 47 species
Ceric.36G048700.1 Ceric.36G048700 not classified & original description: pacid=50569051... 0.04 OrthoFinder output from all 47 species
Dac_g05554 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03875 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g03994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18990 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33762 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23632 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g03474 REME1 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g09691 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14364 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g17020 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g20568 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31366 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g41106 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g45039 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g46160 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g07805 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g15296 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15830 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23751 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38695 No alias ssDNA-binding protein *(OSB) & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g26309 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02967 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03324 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g04335 MEF22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12602 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05218 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08791 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g09510 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10206 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53364 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ppi_g55201 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62885 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09894 CRR2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g28117 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g53368 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06129 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06604 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g19530 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 248 270
IPR002885 Pentatricopeptide_repeat 45 64
IPR002885 Pentatricopeptide_repeat 14 38
IPR002885 Pentatricopeptide_repeat 273 302
IPR002885 Pentatricopeptide_repeat 171 218
IPR002885 Pentatricopeptide_repeat 69 116
No external refs found!