Spa_g23914


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g23914

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.06 OrthoFinder output from all 47 species
AMTR_s00016p00166520 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
Adi_g004268 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g052414 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085794 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g75409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G054200.1 Ceric.02G054200 not classified & original description: pacid=50585961... 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.06 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.06 OrthoFinder output from all 47 species
Ceric.10G028200.1 Ceric.10G028200 ssDNA-binding protein *(OSB) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.18G049200.1 Ceric.18G049200 not classified & original description: pacid=50621468... 0.05 OrthoFinder output from all 47 species
Ceric.1Z242100.1 CRR22, Ceric.1Z242100 not classified & original description: pacid=50573437... 0.06 OrthoFinder output from all 47 species
Ceric.25G017200.1 VAC1, ECB2,... not classified & original description: pacid=50594284... 0.03 OrthoFinder output from all 47 species
Ceric.36G051900.1 Ceric.36G051900 not classified & original description: pacid=50568048... 0.05 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.06 OrthoFinder output from all 47 species
Dac_g05566 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g33215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08457 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22291 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23282 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23168 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28796 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g28116 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g13330 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g43340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g55534 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g56263 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000452 No alias not classified & original description: CDS=1-2067 0.04 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g07089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g18513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20286 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g24319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g27577 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g06491 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
No external refs found!