Spa_g24464 (RAN1, RAN-1, ATRAN1)

Aliases : RAN1, RAN-1, ATRAN1

Description : GTPase *(Ran) & original description: none

Gene families : OG0000916 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000916_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g24464
Cluster	HCCA: Cluster_162

Target	Alias	Description	ECC score	Gene Family Method
Adi_g104949	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Als_g05972	RAN2	GTPase *(Ran) & original description: none	0.09	OrthoFinder output from all 47 species
Aop_g03747	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Aop_g51668	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g08488	RAN2	GTPase *(Ran) & original description: none	0.07	OrthoFinder output from all 47 species
Cba_g45894	RAN2	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.13G064200.1	RAN3, ATRAN3,...	GTPase *(Ran) & original description: pacid=50635025...	0.03	OrthoFinder output from all 47 species
Dac_g03631	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g00706	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02347	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g08919	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g20602	RAN2	GTPase *(Ran) & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01015482001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.03	OrthoFinder output from all 47 species
GSVIVT01035804001	RAN2	Protein translocation.nucleus.nucleocytoplasmic...	0.02	OrthoFinder output from all 47 species
Len_g19642	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g23100	RAN2	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
MA_5657g0020	RAN1, RAN-1, ATRAN1	Ran GTPase	0.03	OrthoFinder output from all 47 species
Msp_g03452	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.06	OrthoFinder output from all 47 species
Msp_g28194	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g08065	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g20179	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g11147	RAN2	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g27776	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g17235	RAN3, ATRAN3	GTPase *(Ran) & original description: none	0.04	OrthoFinder output from all 47 species
Tin_g04345	RAN1, RAN-1, ATRAN1	GTPase *(Ran) & original description: none	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	HCCA
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018208	peptidyl-proline modification	IEP	HCCA
MF	GO:0030599	pectinesterase activity	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001806	Small_GTPase	68	224

External Links

No external refs found!

Spa_g24464 (RAN1, RAN-1, ATRAN1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation