Spa_g24472


Description : SMARCF component *(LFR) of SWI/SNF chromatin remodeling complex & original description: none


Gene families : OG0006179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006179_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24472

Target Alias Description ECC score Gene Family Method Actions
Dde_g16987 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.04 OrthoFinder output from all 47 species
Lfl_g32662 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.03 OrthoFinder output from all 47 species
Pir_g04464 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Ppi_g12752 No alias SMARCF component *(LFR) of SWI/SNF chromatin remodeling... 0.02 OrthoFinder output from all 47 species
Solyc08g077450.4.1 Solyc08g077450 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005956 protein kinase CK2 complex IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902554 serine/threonine protein kinase complex IEP HCCA
CC GO:1902911 protein kinase complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!