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  5. Spa_g24720

Spa_g24720


Description : not classified & original description: none


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24720

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00258400 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT4G11350 No alias Protein of unknown function (DUF604) 0.03 OrthoFinder output from all 47 species
AT5G12460 No alias Protein of unknown function (DUF604) 0.04 OrthoFinder output from all 47 species
Adi_g000658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g045658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13088 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g23788 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13816 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0012.g012981 No alias not classified & original description: CDS=77-1648 0.03 OrthoFinder output from all 47 species
Cba_g03262 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g04658 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g03971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06913 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019400001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01019725001 No alias No description available 0.05 OrthoFinder output from all 47 species
GSVIVT01030630001 No alias No description available 0.05 OrthoFinder output from all 47 species
Gb_10284 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12418 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_25014 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_31866 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g37260.1 LOC_Os10g37260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g04154 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06142 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_5950g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_93259g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02913 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03019 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g19054 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g42679 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000048 No alias not classified & original description: CDS=1-1572 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008392 No alias not classified & original description: CDS=1-1902 0.03 OrthoFinder output from all 47 species
Solyc12g056200.2.1 Solyc12g056200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Tin_g02669 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e002205_P001 Zm00001e002205 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 238 494
No external refs found!