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  5. Spa_g24929

Spa_g24929 (PIR1, MAP1, AUX1, WAV5)


Aliases : PIR1, MAP1, AUX1, WAV5

Description : auxin transporter *(AUX/LAX) & original description: none


Gene families : OG0000450 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000450_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g24929
Cluster HCCA: Cluster_168

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00165970 LAX2,... Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
AT1G77690 LAX3 like AUX1 3 0.03 OrthoFinder output from all 47 species
Ala_g14938 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene21955.t1 LAX2, Aspi01Gene21955 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g04961 PIR1, MAP1, AUX1, WAV5 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g03761 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07943 LAX1 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45735 LAX2 auxin transporter *(AUX/LAX) & original description: none 0.07 OrthoFinder output from all 47 species
Gb_14852 PIR1, MAP1, AUX1, WAV5 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
Gb_25859 PIR1, MAP1, AUX1, WAV5 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
LOC_Os03g14080.1 LAX2, LOC_Os03g14080 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
LOC_Os11g06820.1 LAX3, LOC_Os11g06820 auxin transporter (AUX/LAX) 0.03 OrthoFinder output from all 47 species
Lfl_g36047 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13728 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g03076 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25880 No alias auxin transporter *(AUX/LAX) & original description: none 0.02 OrthoFinder output from all 47 species
Smo127494 LAX1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Solyc01g111310.3.1 LAX2, Solyc01g111310 auxin transporter (AUX/LAX) 0.02 OrthoFinder output from all 47 species
Tin_g13044 PIR1, MAP1, AUX1, WAV5 auxin transporter *(AUX/LAX) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e031745_P002 LAX1, Zm00001e031745 auxin transporter (AUX/LAX) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0008430 selenium binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 44 436
No external refs found!