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  4. Sequence
  5. Spa_g25322

Spa_g25322


Description : not classified & original description: none


Gene families : OG0000074 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000074_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g25322
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Ala_g19536 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g69438 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g01951 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g24656 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.25G059200.1 ATSTP13, MSS1,... monosaccharide transporter *(STP) & original... 0.04 OrthoFinder output from all 47 species
Dde_g17104 ATSTP13, MSS1, STP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23017 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.07 OrthoFinder output from all 47 species
LOC_Os04g37970.1 LOC_Os04g37970 monosaccharide transporter (STP) 0.04 OrthoFinder output from all 47 species
LOC_Os06g04900.1 LOC_Os06g04900 monosaccharide transporter (STP) 0.04 OrthoFinder output from all 47 species
LOC_Os07g01560.1 ATSTP1, STP1,... monosaccharide transporter (STP) 0.03 OrthoFinder output from all 47 species
LOC_Os09g09520.1 LOC_Os09g09520 monosaccharide transporter (STP) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41190.1 LOC_Os10g41190 monosaccharide transporter (STP) 0.03 OrthoFinder output from all 47 species
Msp_g35726 STP7 monosaccharide transporter *(STP) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45108 ATSTP13, MSS1, STP13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14074 STP7 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g66339 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53901 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g093410.3.1 Solyc03g093410 monosaccharide transporter (STP) 0.03 OrthoFinder output from all 47 species
Solyc05g018230.4.1 AtSTP14, STP14,... monosaccharide transporter (STP) 0.03 OrthoFinder output from all 47 species
Spa_g11965 STP7 monosaccharide transporter *(STP) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06933 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32279 ATSTP13, MSS1, STP13 monosaccharide transporter *(STP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004739_P001 Zm00001e004739 monosaccharide transporter (STP) 0.02 OrthoFinder output from all 47 species
Zm00001e032664_P002 ATSTP1, STP1,... monosaccharide transporter (STP) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR005828 MFS_sugar_transport-like 1 512
No external refs found!