Spa_g26164

Description : not classified & original description: none

Gene families : OG0006276 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006276_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g26164

Target	Alias	Description	ECC score	Gene Family Method
Dcu_g14259	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
MA_1542g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Sam_g26041	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc01g097070.4.1	Solyc01g097070	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Tin_g20274	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010666	Znf_GRF	248	291
IPR010666	Znf_GRF	313	356
IPR010666	Znf_GRF	183	226
IPR001878	Znf_CCHC	141	157
IPR001878	Znf_CCHC	417	434
IPR001878	Znf_CCHC	530	545
IPR001878	Znf_CCHC	486	502

External Links

No external refs found!