1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g26714

Spa_g26714 (ATHSF1, HSF1, HSFA1A, ATHSFA1A)


Aliases : ATHSF1, HSF1, HSFA1A, ATHSFA1A

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26714
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00264800 AT-HSFA7A,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AMTR_s00040p00209530 HSFA1E,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
AMTR_s00073p00033500 HSFB4, SCZ,... RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
AT4G11660 AT-HSFB2B, HSFB2B winged-helix DNA-binding transcription factor family protein 0.03 OrthoFinder output from all 47 species
AT4G18880 HSF A4A, AT-HSFA4A heat shock transcription factor A4A 0.02 OrthoFinder output from all 47 species
AT4G36990 HSF4, HSFB1,... heat shock factor 4 0.04 OrthoFinder output from all 47 species
Adi_g058298 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18842 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21331 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g27045 HSFA1B, ATHSF3,... transcriptional regulator *(HsfA1) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30082 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37067 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g51704 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05891 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08951 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g41074 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g19456 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30579.t1 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46932.t1 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene55061.t1 HSFB4, SCZ,... HSF-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g15368 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g78307 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.06G009100.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.15G065200.1 HSFA1E,... HSF-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.15G074700.1 HSFB4, SCZ,... HSF-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dcu_g03864 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19730 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21083 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g04697 HSF4, HSFB1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10301 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13990 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26513 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01020781001 HSFA4C, RHA1, AT-HSFA4C RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
GSVIVT01021269001 HSF A4A, AT-HSFA4A RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.04 OrthoFinder output from all 47 species
LOC_Os02g32590.1 HSFA3, AT-HSFA3,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g25120.1 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
LOC_Os08g36700.1 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Len_g10124 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g28547 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g29724 HSFA1E, ATHSFA1E HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27595 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_110587g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Msp_g01160 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09006 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g19596 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g24815 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g06498 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14719 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06083 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30924 AT-HSFA5, HSFA5 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02775 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07494 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13558 ATHSF1, HSF1,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g57933 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g62641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g14010 No alias HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g016000.3.1 AT-HSFB3, HSFB3,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Solyc06g053960.3.1 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Solyc09g059520.3.1 HSFA8, AT-HSFA8,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Tin_g38102 HSFA1B, ATHSF3,... HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e003755_P002 AT-HSFB2A,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
Zm00001e024268_P001 AT-HSFB2A,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
Zm00001e029052_P001 HSFA4C, RHA1,... transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
Zm00001e034336_P001 HSFB4, SCZ,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 56 145
No external refs found!