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  5. Spa_g26732

Spa_g26732 (ATSS4, SS4, SSIV)


Aliases : ATSS4, SS4, SSIV

Description : starch synthase *(SS5) & original description: none


Gene families : OG0000693 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000693_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g26732
Cluster HCCA: Cluster_178

Target Alias Description ECC score Gene Family Method Actions
AT1G11720 ATSS3, SS3 starch synthase 3 0.05 OrthoFinder output from all 47 species
Adi_g087898 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g25563 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05131 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g02168 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11092 ATSS4, SS4, SSIV starch synthase *(SS4) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g43255 ATSS4, SS4, SSIV not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g08030.1 ATSS4, SS4, SSIV Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 OrthoFinder output from all 47 species
Msp_g25353 ATSS4, SS4, SSIV starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g34784 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g18177 ATSS3, SS3 starch synthase *(SS3) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10107 ATSS4, SS4, SSIV not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12030 No alias starch synthase *(SS5) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51042 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51044 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g071040.3.1 ATSS4, SS4,... starch synthase (SSIV) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0070569 uridylyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR013534 Starch_synth_cat_dom 235 469
No external refs found!