Spa_g27690


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g27690

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
Adi_g002798 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g003816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003868 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004274 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004424 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g004506 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005450 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g005534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g006931 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g010272 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g013821 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g015809 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g017810 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g019398 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023974 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g035621 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036757 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g059925 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067302 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g069239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079640 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082696 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101197 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g102724 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103893 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g110083 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g25745 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g16068 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05931 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08134 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g08870 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g09609 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16217 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g17318 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23948 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23951 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g28311 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g28403 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31523 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38034 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63229 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70213 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g10692 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.04 OrthoFinder output from all 47 species
Ceric.09G023600.1 Ceric.09G023600 not classified & original description: pacid=50587368... 0.04 OrthoFinder output from all 47 species
Ceric.18G049200.1 Ceric.18G049200 not classified & original description: pacid=50621468... 0.04 OrthoFinder output from all 47 species
Ceric.1Z242100.1 CRR22, Ceric.1Z242100 not classified & original description: pacid=50573437... 0.04 OrthoFinder output from all 47 species
Ceric.36G051900.1 Ceric.36G051900 not classified & original description: pacid=50568048... 0.04 OrthoFinder output from all 47 species
Ceric.37G053600.1 Ceric.37G053600 not classified & original description: pacid=50616731... 0.04 OrthoFinder output from all 47 species
Dac_g03825 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g12583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g18724 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19095 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g22537 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g30492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g31947 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g36045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g40230 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42750 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43237 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06339 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08616 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g09173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18565 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03121 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17695 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23166 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g26950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g30376 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33983 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g35976 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g38952 OTP81 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g41084 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46118 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g32187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38613 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g42021 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g04704 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18166 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53593 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g61878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15563 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16299 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g16744 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo72131 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo91949 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc03g096610.2.1 Solyc03g096610 Pentatricopeptide repeat-containing protein At1g33350... 0.03 OrthoFinder output from all 47 species
Spa_g01958 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08732 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10971 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12946 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g13637 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14012 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g14151 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14257 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14295 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g14329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g16630 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g19945 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g20184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g20286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21942 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g24297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g25998 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27577 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g31188 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g41043 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45659 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52644 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g57231 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05231 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13479 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 278 325
IPR002885 Pentatricopeptide_repeat 177 223
IPR002885 Pentatricopeptide_repeat 76 122
IPR002885 Pentatricopeptide_repeat 380 428
IPR002885 Pentatricopeptide_repeat 253 274
IPR002885 Pentatricopeptide_repeat 456 476
IPR002885 Pentatricopeptide_repeat 150 171
No external refs found!