Spa_g27905


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g27905
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
Adi_g002304 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g019623 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023226 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025491 CRR2 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Adi_g030218 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g068895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g085640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g17904 REME1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03329 MEF22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g03973 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g05235 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g10477 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16095 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g16818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21617 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g23677 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g25531 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g29950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30470 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31676 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g31824 VAC1, ECB2, ATECB2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33219 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g33556 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g51258 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68120 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0007.g010584 No alias not classified & original description: CDS=134-2257 0.05 OrthoFinder output from all 47 species
Azfi_s0109.g045373 No alias not classified & original description: CDS=1-2985 0.06 OrthoFinder output from all 47 species
Azfi_s0236.g059504 No alias not classified & original description: CDS=1-2307 0.05 OrthoFinder output from all 47 species
Azfi_s0237.g059606 No alias not classified & original description: CDS=1-2121 0.05 OrthoFinder output from all 47 species
Azfi_s0264.g060909 EMB2758 not classified & original description: CDS=1-2373 0.1 OrthoFinder output from all 47 species
Azfi_s0601.g078897 No alias not classified & original description: CDS=1-2646 0.05 OrthoFinder output from all 47 species
Cba_g69270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G041900.1 Ceric.07G041900 not classified & original description: pacid=50628055... 0.05 OrthoFinder output from all 47 species
Ceric.10G012900.1 CRR22, Ceric.10G012900 not classified & original description: pacid=50612392... 0.05 OrthoFinder output from all 47 species
Ceric.17G033700.1 VAC1, ECB2,... not classified & original description: pacid=50617387... 0.06 OrthoFinder output from all 47 species
Ceric.17G054900.1 DOT4, Ceric.17G054900 not classified & original description: pacid=50617812... 0.03 OrthoFinder output from all 47 species
Ceric.18G023200.1 Ceric.18G023200 not classified & original description: pacid=50622130... 0.04 OrthoFinder output from all 47 species
Ceric.28G026700.1 Ceric.28G026700 not classified & original description: pacid=50570188... 0.06 OrthoFinder output from all 47 species
Dac_g03344 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42963 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g44312 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24873 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g36765 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g38992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04350 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07406 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Lfl_g25822 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14419 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g20567 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g22930 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g31578 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g33329 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23739 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g41053 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g01302 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g02088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g07306 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19928 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21836 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g40481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43620 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Pir_g02508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03331 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12777 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g12874 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14721 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g63650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65902 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06488 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g10481 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29710 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33094 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g36021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g49408 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53202 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53968 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g57466 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g58117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59214 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g62122 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo172234 No alias Pentatricopeptide repeat-containing protein At4g14050,... 0.03 OrthoFinder output from all 47 species
Spa_g14009 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g22837 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g32773 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g33733 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g45608 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g47250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g53489 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56307 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g12955 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 20 66
IPR002885 Pentatricopeptide_repeat 121 168
IPR002885 Pentatricopeptide_repeat 95 115
IPR002885 Pentatricopeptide_repeat 197 219
No external refs found!