Description : component *(U1C) of U1 snRNP complex & original description: none
Gene families : OG0002867 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002867_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g29133 | |
| Cluster | HCCA: Cluster_210 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G03120 | No alias | C2H2 and C2HC zinc fingers superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g09085 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g12591 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.09G046300.1 | Ceric.09G046300 | component *(U1C) of U1 snRNP complex & original... | 0.05 | OrthoFinder output from all 47 species | |
| Cre09.g401300 | No alias | RNA processing.RNA splicing.U2-type-intron-specific... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g00331 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10433804g0010 | No alias | component U1C of U1 small nuclear ribonucleoprotein... | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g35029 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06327 | No alias | component *(U1C) of U1 snRNP complex & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008270 | zinc ion binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR013085 | U1-CZ_Znf_C2H2 | 1 | 38 |
| No external refs found! |
