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  5. Spa_g29547

Spa_g29547


Description : regulatory protein (CIB) of blue light perception & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29547

Target Alias Description ECC score Gene Family Method Actions
Aev_g10597 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.09G081300.1 LRL3, Ceric.09G081300 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10732 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06330 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dcu_g19533 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dde_g26546 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Lfl_g38961 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Mp1g19210.1 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Msp_g26946 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44898 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g24048 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Smo24892 LRL1 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 472 519
No external refs found!