Spa_g29568


Description : not classified & original description: none


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29568

Target Alias Description ECC score Gene Family Method Actions
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g008111 No alias KANAdi-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09241 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09581 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33847 KAN, KAN1 KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g01763 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Aob_g29353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33756.t1 Aspi01Gene33756 transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0031.g024472 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g05727 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g09042 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ceric.07G015300.1 Ceric.07G015300 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g04269 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g15392 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dde_g08284 KAN4, ATS KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g23417 KAN, KAN1 KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46936 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g06852 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ehy_g11610 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ehy_g29468 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_41007 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Len_g03175 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g02992 No alias GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Lfl_g05530 PHL1 GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Lfl_g27534 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Nbi_g12621 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g26114 PHL1 transcription factor *(PHR1) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g62725 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g05575 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ppi_g06853 No alias transcription factor *(CLAUSA) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007773 PHL1 not classified & original description: CDS=638-1480 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014434 No alias not classified & original description: CDS=36-716 0.05 OrthoFinder output from all 47 species
Sam_g13225 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g04247 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g22319 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g56754 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Tin_g03358 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Tin_g10830 KAN4, ATS KANADI-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004125_P001 Zm00001e004125 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e039024_P001 Zm00001e039024 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004455 ketol-acid reductoisomerase activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006534 cysteine metabolic process IEP HCCA
BP GO:0006535 cysteine biosynthetic process from serine IEP HCCA
BP GO:0006563 L-serine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0009001 serine O-acetyltransferase activity IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009070 serine family amino acid biosynthetic process IEP HCCA
BP GO:0009081 branched-chain amino acid metabolic process IEP HCCA
BP GO:0009082 branched-chain amino acid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016407 acetyltransferase activity IEP HCCA
MF GO:0016412 serine O-acyltransferase activity IEP HCCA
MF GO:0016413 O-acetyltransferase activity IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
BP GO:0019344 cysteine biosynthetic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 90 114
IPR025756 Myb_CC_LHEQLE 40 62
No external refs found!