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  5. Spa_g29581

Spa_g29581 (AFB2)


Aliases : AFB2

Description : not classified & original description: none


Gene families : OG0000211 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000211_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29581

Target Alias Description ECC score Gene Family Method Actions
Adi_g005427 AFB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g014124 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g053952 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056234 AFB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g112625 AFB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02846 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ehy_g01586 TIR1 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.03 OrthoFinder output from all 47 species
Msp_g14907 COI1 component *(COI) of jasmonic acid receptor complex &... 0.03 OrthoFinder output from all 47 species
Ppi_g15539 AFB2 substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB)... 0.02 OrthoFinder output from all 47 species
Zm00001e026935_P001 COI1, Zm00001e026935 component COI of jasmonic acid receptor complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA

No InterPro domains available for this sequence

No external refs found!