Aliases : UBQ6
Description : component *(eS31) of small ribosomal-subunit (SSU) proteome & original description: none
Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00017p00094950 | UBQ6,... | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00040p00104050 | evm_27.TU.AmTr_v1... | Ubiquitin-60S ribosomal protein L40 OS=Nicotiana sylvestris | 0.03 | OrthoFinder output from all 47 species | |
| AT2G36170 | No alias | Ubiquitin supergroup;Ribosomal protein L40e | 0.02 | OrthoFinder output from all 47 species | |
| AT2G47110 | UBQ6 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G52590 | UBQ1, EMB2167,... | ubiquitin extension protein 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT3G62250 | UBQ5 | ubiquitin 5 | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g023730 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g00530 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ala_g22856 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31252 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g18351 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g46335 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g63748 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g16439 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g30723 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g64104 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene27260.t1 | UBQ10, Aspi01Gene27260 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g23546 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g45568 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.21G057000.1 | UBQ6, Ceric.21G057000 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.21G057400.1 | UBQ6, Ceric.21G057400 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.22G050200.1 | UBQ6, Ceric.22G050200 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Ceric.31G025200.1 | UBQ14, Ceric.31G025200 | UBQ ubiquitin-fold protein & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00022075.50 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.01 | OrthoFinder output from all 47 species | |
| Cre01.g007051 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Cre06.g273600 | UBQ6 | Protein biosynthesis.cytosolic ribosome.small subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g08496 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g44234 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26143 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g38726 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01038617001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_15027 | UBQ6 | component RPS27a of SSU proteome | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40288 | UBQ6 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Gb_41257 | No alias | component RPL40 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os01g22490.1 | UBQ6, LOC_Os01g22490 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g06770.1 | UBQ6, LOC_Os05g06770 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g16683 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_13101g0020 | No alias | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Mp7g12760.1 | UBQ6 | component RPS27a of SSU proteome | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g00780.1 | No alias | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g24177 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g34986 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g35305 | UBQ6 | component *(eS31) of small ribosomal-subunit (SSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g23785 | RUB1, ATRUB1, NEDD8 | UBQ ubiquitin-fold protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pp3c10_25270V3.1 | Pp3c10_25270 | ubiquitin extension protein 1 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c12_5640V3.1 | UBQ6, Pp3c12_5640 | ubiquitin 6 | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c12_5760V3.1 | UBQ6, Pp3c12_5760 | ubiquitin 6 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c20_23170V3.1 | Pp3c20_23170 | ubiquitin extension protein 1 | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c24_430V3.1 | Pp3c24_430 | ubiquitin extension protein 1 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c4_19000V3.1 | UBQ6, Pp3c4_19000 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c8_14230V3.1 | UBQ6, Pp3c8_14230 | ubiquitin 6 | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g19899 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ppi_g21095 | UBQ11 | UBQ ubiquitin-fold protein & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g07360 | No alias | component *(eS31) of small ribosomal-subunit (SSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Smo93613 | RUB1, ATRUB1, NEDD8 | Ubiquitin-NEDD8-like protein RUB1 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g082570.4.1 | Solyc03g082570 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g008590.4.1 | Solyc08g008590 | component RPL40 of LSU proteome component | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g083120.3.1 | Solyc08g083120 | component RPL40 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g28918 | No alias | component *(eL40) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e000965_P001 | Zm00001e000965 | component RPL40 of LSU proteome component | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e009474_P001 | Zm00001e009474 | component RPL40 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034164_P001 | RUB1, ATRUB1,... | ubiquitin-fold protein (RUB) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0003746 | translation elongation factor activity | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006417 | regulation of translation | IEP | HCCA |
| BP | GO:0006448 | regulation of translational elongation | IEP | HCCA |
| BP | GO:0006449 | regulation of translational termination | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009891 | positive regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0009893 | positive regulation of metabolic process | IEP | HCCA |
| BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0010608 | post-transcriptional regulation of gene expression | IEP | HCCA |
| BP | GO:0010628 | positive regulation of gene expression | IEP | HCCA |
| BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0034248 | regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034250 | positive regulation of amide metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0043021 | ribonucleoprotein complex binding | IEP | HCCA |
| MF | GO:0043022 | ribosome binding | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043243 | positive regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043244 | regulation of protein-containing complex disassembly | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| MF | GO:0044877 | protein-containing complex binding | IEP | HCCA |
| MF | GO:0045182 | translation regulator activity | IEP | HCCA |
| BP | GO:0045727 | positive regulation of translation | IEP | HCCA |
| BP | GO:0045901 | positive regulation of translational elongation | IEP | HCCA |
| BP | GO:0045905 | positive regulation of translational termination | IEP | HCCA |
| BP | GO:0048518 | positive regulation of biological process | IEP | HCCA |
| BP | GO:0048522 | positive regulation of cellular process | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051246 | regulation of protein metabolic process | IEP | HCCA |
| BP | GO:0051247 | positive regulation of protein metabolic process | IEP | HCCA |
| MF | GO:0090079 | translation regulator activity, nucleic acid binding | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | HCCA |
| No external refs found! |
