1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g29801

Spa_g29801 (ATBHLH029, BHLH029,...)


Aliases : ATBHLH029, BHLH029, FIT1, ATBHLH29, FRU, ATFIT1

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g29801
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00056000 ATBHLH029,... Nutrient uptake.iron uptake.reduction-based strategy... 0.02 OrthoFinder output from all 47 species
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.03 OrthoFinder output from all 47 species
Adi_g024935 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024936 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g09209 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33297 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09875 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26760 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g37060 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08956 SCRM2, ICE2 transcriptional regulator *(DYT1/AMS) & original... 0.02 OrthoFinder output from all 47 species
Aop_g05844 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g21757 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44253.t1 Aspi01Gene44253 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene45944.t1 Aspi01Gene45944 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000316 No alias bHLH-type transcription factor & original description: CDS=1-702 0.03 OrthoFinder output from all 47 species
Cba_g50660 AMS bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G091400.1 ATICE1, ICE1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.01G091600.1 Ceric.01G091600 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Ceric.13G011000.1 Ceric.13G011000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g10528 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g10672 AMS bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14460 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g31412 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51705 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13552 ATBHLH029,... bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g27756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g13184 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029311001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os04g23550.1 LOC_Os04g23550 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39750.1 bHLH093, LOC_Os10g39750 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_10429407g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_10431811g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_126263g0010 AMS transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_196213g0010 SCRM2, ICE2 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_28638g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_387150g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_4395g0010 AMS transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_780853g0010 ATBHLH029,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_86748g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g06243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18806 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g32399 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g09269 AMS bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0030.g010285 No alias bHLH-type transcription factor & original description: CDS=1-1623 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015846 No alias bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020579 No alias bHLH-type transcription factor & original description: CDS=1-1245 0.03 OrthoFinder output from all 47 species
Sam_g34229 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc06g051550.4.1 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.02 OrthoFinder output from all 47 species
Spa_g09017 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10104 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29282 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g30853 No alias bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g39236 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g13669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g43403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008393_P001 ATBHLH029,... transcription factor (bHLH). iron uptake transcription factor FIT 0.03 OrthoFinder output from all 47 species
Zm00001e040186_P002 Zm00001e040186 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e040675_P003 Zm00001e040675 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e040732_P001 ATBHLH029,... transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 291 333
No external refs found!