Spa_g30129 (LBD4)

Aliases : LBD4

Description : AS2/LOB-type transcription factor & original description: none

Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g30129
Cluster	HCCA: Cluster_9

Target	Alias	Description	ECC score	Gene Family Method
AT1G07900	LBD1	LOB domain-containing protein 1	0.03	OrthoFinder output from all 47 species
Aop_g28141	LBD4	AS2/LOB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g12193	LBD4	AS2/LOB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01007677001	LOB	RNA biosynthesis.transcriptional activation.AS2/LOB...	0.03	OrthoFinder output from all 47 species
Gb_21467	LBD22	transcription factor (AS2/LOB)	0.03	OrthoFinder output from all 47 species
LOC_Os03g05500.1	LBD29, ASL16,...	transcription factor (AS2/LOB)	0.02	OrthoFinder output from all 47 species
LOC_Os03g17810.1	LBD11, LOC_Os03g17810	transcription factor (AS2/LOB)	0.03	OrthoFinder output from all 47 species
Ppi_g31655	LBD4	AS2/LOB-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g044520.2.1	LBD11, Solyc01g044520	transcription factor (AS2/LOB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

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Type	GO Term	Name	Evidence	Source
MF	GO:0008134	transcription factor binding	IEP	HCCA
MF	GO:0017025	TBP-class protein binding	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA
MF	GO:0140296	general transcription initiation factor binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004883	LOB	55	152

External Links

No external refs found!