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  5. Spa_g30142

Spa_g30142


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30142
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
Aob_g34695 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g47659 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g22713 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30408 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
MA_118965g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07954 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29733 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g02574 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21710 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0030246 carbohydrate binding IEP HCCA
InterPro domains Description Start Stop
IPR018392 LysM_dom 33 75
IPR001223 Glyco_hydro18_cat 111 279
No external refs found!