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  5. Aev_g21988

Aev_g21988 (AtcpRRF, HFP108, cpRRF, RRF)


Aliases : AtcpRRF, HFP108, cpRRF, RRF

Description : translation ribosome recycling factor *(RRF) & original description: none


Gene families : OG0006870 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006870_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Aev_g21988
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AT3G63190 AtcpRRF, HFP108,... ribosome recycling factor, chloroplast precursor 0.03 OrthoFinder output from all 47 species
Aop_g23021 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Aspi01Gene01280.t1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Cba_g05774 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.11 OrthoFinder output from all 47 species
Ceric.25G011000.1 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Cre03.g156050 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Dde_g00377 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.08 OrthoFinder output from all 47 species
GSVIVT01001148001 AtcpRRF, HFP108,... Protein biosynthesis.organelle translation... 0.04 OrthoFinder output from all 47 species
LOC_Os07g38300.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.03 OrthoFinder output from all 47 species
Len_g47851 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g05872 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Mp5g14000.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.04 OrthoFinder output from all 47 species
Msp_g11460 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g28974 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Ore_g04942 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Pir_g17819 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.04 OrthoFinder output from all 47 species
Pir_g48097 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Pnu_g08783 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.02 OrthoFinder output from all 47 species
Ppi_g10744 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006320 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Sam_g15107 No alias translation ribosome recycling factor *(RRF) & original... 0.08 OrthoFinder output from all 47 species
Solyc09g065270.3.1 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.03 OrthoFinder output from all 47 species
Spa_g44127 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.07 OrthoFinder output from all 47 species
Tin_g00796 AtcpRRF, HFP108,... translation ribosome recycling factor *(RRF) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e021862_P002 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.03 OrthoFinder output from all 47 species
Zm00001e029168_P003 AtcpRRF, HFP108,... RRF translation ribosome recycling factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023584 Ribosome_recyc_fac_dom 102 263
No external refs found!