Spa_g30251


Description : not classified & original description: none


Gene families : OG0000762 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000762_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30251

Target Alias Description ECC score Gene Family Method Actions
Ala_g15482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g17436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0057.g034270 No alias not classified & original description: CDS=93-647 0.01 OrthoFinder output from all 47 species
Cba_g00878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.24G022100.1 Ceric.24G022100 not classified & original description: pacid=50630020... 0.01 OrthoFinder output from all 47 species
Pir_g08191 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001050_P001 Zm00001e001050 HVA22-like protein i OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006405 RNA export from nucleus IEP HCCA
BP GO:0006406 mRNA export from nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
CC GO:0008541 proteasome regulatory particle, lid subcomplex IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0050657 nucleic acid transport IEP HCCA
BP GO:0050658 RNA transport IEP HCCA
BP GO:0051028 mRNA transport IEP HCCA
BP GO:0051168 nuclear export IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051236 establishment of RNA localization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 17 95
No external refs found!