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  5. Spa_g30472

Spa_g30472 (ATASE1, ATASE, ASE1)


Aliases : ATASE1, ATASE, ASE1

Description : EC_2.4 glycosyltransferase & original description: none


Gene families : OG0002289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002289_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30472

Target Alias Description ECC score Gene Family Method Actions
Aop_g21921 ATASE1, ATASE, ASE1 EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g03049 ATASE1, ATASE, ASE1 EC_2.4 glycosyltransferase & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g06656 No alias EC_2.4 glycosyltransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR017932 GATase_2_dom 182 298
IPR000836 PRibTrfase_dom 370 470
No external refs found!