Description : ER-tubule curvature-inducing protein *(Reticulon) & original description: none
Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Spa_g30830 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00029p00201410 | evm_27.TU.AmTr_v1... | Reticulon-like protein B12 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g24666 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19143 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Als_g42720 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene70932.t1 | RTNLB2, BTI2,... | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g08417 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01005053001 | RTNLB13 | Reticulon-like protein B13 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g16620.1 | RTNLB2, BTI2,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g22278 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g27211 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39178 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g27012 | RTNLB2, BTI2 | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0185.g025006 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g20068 | No alias | ER-tubule curvature-inducing protein *(Reticulon) &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g090370.4.1 | Solyc02g090370 | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g081730.4.1 | RTNLB2, BTI2,... | ER-associated protein (Reticulon) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031043_P001 | RTNLB2, BTI2,... | ER-associated protein (Reticulon) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| MF | GO:0003729 | mRNA binding | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0017111 | ribonucleoside triphosphate phosphatase activity | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
| CC | GO:0035145 | exon-exon junction complex | IEP | HCCA |
| MF | GO:0043167 | ion binding | IEP | HCCA |
| CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
| BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
| CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
| CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003388 | Reticulon | 124 | 278 |
| No external refs found! |
