1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g30853

Spa_g30853


Description : bHLH-type transcription factor & original description: none


Gene families : OG0000267 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000267_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g30853
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00254380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
Adi_g022340 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g024935 ATICE1, ICE1, SCRM bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g09209 ATMYC2, MYC2,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g31653 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33297 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g09875 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g08956 SCRM2, ICE2 transcriptional regulator *(DYT1/AMS) & original... 0.03 OrthoFinder output from all 47 species
Aop_g03907 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05844 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11432 ATBHLH029,... bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g11860 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g25422 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene06511.t1 Aspi01Gene06511 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15970 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g50660 AMS bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.01G091400.1 ATICE1, ICE1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.01G091600.1 Ceric.01G091600 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.01G112100.1 Ceric.01G112100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G045100.1 Ceric.20G045100 bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.29G058800.1 Ceric.29G058800 bHLH-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g10528 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10672 AMS bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g22613 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19595 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_15579 SCRM2, ICE2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os10g39750.1 bHLH093, LOC_Os10g39750 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_2643g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
MA_4395g0010 AMS transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_439607g0010 SCRM2, ICE2 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Mp2g07150.1 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Nbi_g02789 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g06961 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07432 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08843 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g18806 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45924 ATBHLH029,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0138.g022593 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g10837 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34229 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g014590.3.1 Solyc05g014590 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Spa_g02622 No alias bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g10104 ATBHLH029,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29282 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29801 ATBHLH029,... bHLH-type transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Spa_g45568 ATBHLH029,... bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g52634 SCRM2, ICE2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09494 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 149 190
No external refs found!