Spa_g33770


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g33770

Target Alias Description ECC score Gene Family Method Actions
Adi_g004476 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005730 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g097033 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g118106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26222 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30489 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g30577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g61024 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13601 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05734 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09867 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g14571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g23572 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28706 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g28726 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g35630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38453 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000731 No alias not classified & original description: CDS=1-3192 0.04 OrthoFinder output from all 47 species
Azfi_s0010.g012416 No alias not classified & original description: CDS=1-1722 0.04 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.05 OrthoFinder output from all 47 species
Cba_g05956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g05972 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16610 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19545 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20830 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g22562 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29991 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g38847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74968 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G107500.1 Ceric.01G107500 not classified & original description: pacid=50592273... 0.05 OrthoFinder output from all 47 species
Ceric.02G043000.1 Ceric.02G043000 not classified & original description: pacid=50585529... 0.03 OrthoFinder output from all 47 species
Ceric.04G103400.1 Ceric.04G103400 not classified & original description: pacid=50630509... 0.04 OrthoFinder output from all 47 species
Ceric.05G058700.1 Ceric.05G058700 not classified & original description: pacid=50578964... 0.04 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.03 OrthoFinder output from all 47 species
Ceric.07G067300.1 Ceric.07G067300 not classified & original description: pacid=50625994... 0.03 OrthoFinder output from all 47 species
Ceric.07G081900.1 Ceric.07G081900 not classified & original description: pacid=50627936... 0.03 OrthoFinder output from all 47 species
Ceric.09G023800.1 Ceric.09G023800 not classified & original description: pacid=50587607... 0.04 OrthoFinder output from all 47 species
Ceric.16G072300.1 Ceric.16G072300 not classified & original description: pacid=50590183... 0.04 OrthoFinder output from all 47 species
Ceric.18G014200.1 VAC1, ECB2,... not classified & original description: pacid=50622305... 0.03 OrthoFinder output from all 47 species
Ceric.1Z005100.1 Ceric.1Z005100 not classified & original description: pacid=50567700... 0.03 OrthoFinder output from all 47 species
Ceric.22G064700.1 Ceric.22G064700 not classified & original description: pacid=50614857... 0.05 OrthoFinder output from all 47 species
Ceric.23G042100.1 Ceric.23G042100 not classified & original description: pacid=50611070... 0.03 OrthoFinder output from all 47 species
Ceric.25G002100.1 Ceric.25G002100 not classified & original description: pacid=50593112... 0.03 OrthoFinder output from all 47 species
Ceric.34G031000.1 CRR22, Ceric.34G031000 not classified & original description: pacid=50623613... 0.05 OrthoFinder output from all 47 species
Ceric.38G063600.1 Ceric.38G063600 not classified & original description: pacid=50580365... 0.04 OrthoFinder output from all 47 species
Ceric.39G011500.1 Ceric.39G011500 not classified & original description: pacid=50582697... 0.03 OrthoFinder output from all 47 species
Ceric.39G022100.1 Ceric.39G022100 not classified & original description: pacid=50582510... 0.04 OrthoFinder output from all 47 species
Dac_g04642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07007 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24894 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g25154 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g35266 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36384 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07693 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g03462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g04853 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g15843 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18756 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23999 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25598 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g26014 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26380 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35433 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46394 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07052 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19509 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g20812 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
GSVIVT01032950001 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_22996 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.04 OrthoFinder output from all 47 species
LOC_Os08g42610.1 OTP81, LOC_Os08g42610 Pentatricopeptide repeat-containing protein At2g29760,... 0.04 OrthoFinder output from all 47 species
Len_g04367 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05598 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06745 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g10515 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g13946 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g24046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25656 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g28173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_615077g0010 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
Msp_g12042 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g14157 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17708 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g23052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40822 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g41077 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47203 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48594 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g11260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g11891 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g15169 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38399 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38636 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g13622 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16586 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g23564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04611 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g05887 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g47181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015137 No alias not classified & original description: CDS=1-2661 0.02 OrthoFinder output from all 47 species
Sam_g08388 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g099000.1.1 Solyc01g099000 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Solyc06g064600.1.1 Solyc06g064600 Pentatricopeptide repeat-containing protein At1g56690,... 0.03 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06129 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g06419 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g26548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 122
IPR002885 Pentatricopeptide_repeat 182 224
IPR002885 Pentatricopeptide_repeat 280 327
IPR002885 Pentatricopeptide_repeat 152 178
IPR002885 Pentatricopeptide_repeat 253 276
IPR002885 Pentatricopeptide_repeat 354 381
IPR046848 E_motif 399 443
No external refs found!