Spa_g33960 (UBQ6)

Aliases : UBQ6

Description : component *(eS31) of small ribosomal-subunit (SSU) proteome & original description: none

Gene families : OG0000054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g33960

Target	Alias	Description	ECC score	Gene Family Method
Als_g26763	UBQ11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene08341.t1	UBQ11, Aspi01Gene08341	UBQ ubiquitin-fold protein & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g34959	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g74420	No alias	component *(eS31) of small ribosomal-subunit (SSU)...	0.04	OrthoFinder output from all 47 species
Ceric.08G062800.1	UBQ11, Ceric.08G062800	UBQ ubiquitin-fold protein & original description:...	0.03	OrthoFinder output from all 47 species
LOC_Os10g39590.1	LOC_Os10g39590	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g17628	UBQ11	UBQ ubiquitin-fold protein & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g22530	UBQ6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g31018	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e000965_P001	Zm00001e000965	component RPL40 of LSU proteome component	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
BP	GO:0006413	translational initiation	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000626	Ubiquitin-like_dom	1	23
IPR002906	Ribosomal_S27a	52	96

External Links

No external refs found!

Spa_g33960 (UBQ6)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation