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  5. Spa_g37053

Spa_g37053 (OPT4, ATOPT4)


Aliases : OPT4, ATOPT4

Description : oligopeptide transporter *(OPT) & original description: none


Gene families : OG0000539 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g37053

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00190940 OPT1, ATOPT1,... Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
AT5G64410 OPT4, ATOPT4 oligopeptide transporter 4 0.02 OrthoFinder output from all 47 species
Aev_g44135 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10768 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16370 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g18410 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g26677 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14475.t1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20038.t1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20040.t1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0001.g000194 OPT3, ATOPT3 oligopeptide transporter *(OPT) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g25768 OPT4, ATOPT4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G084900.1 OPT4, ATOPT4,... oligopeptide transporter *(OPT) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g19179 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46396 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01005133001 OPT3, ATOPT3 Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
GSVIVT01009224001 OPT4, ATOPT4 Solute transport.carrier-mediated transport.OPT... 0.04 OrthoFinder output from all 47 species
GSVIVT01038599001 OPT6, ATOPT6 Solute transport.carrier-mediated transport.OPT... 0.02 OrthoFinder output from all 47 species
Gb_02113 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
LOC_Os06g03700.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
MA_27970g0010 OPT3, ATOPT3 oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Mp3g03750.1 ATOPT2, OPT2 oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Mp4g06980.1 OPT7, ATOPT7 oligopeptide transporter (OPT) 0.02 OrthoFinder output from all 47 species
Pnu_g09570 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0024.g009089 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description:... 0.03 OrthoFinder output from all 47 species
Smo88962 OPT7, ATOPT7 Solute transport.carrier-mediated transport.OPT... 0.05 OrthoFinder output from all 47 species
Solyc03g033460.3.1 OPT7, ATOPT7,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Solyc04g076750.2.1 ATOPT2, OPT2,... oligopeptide transporter (OPT) 0.03 OrthoFinder output from all 47 species
Spa_g05930 OPT7, ATOPT7 oligopeptide transporter *(OPT) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g02109 OPT4, ATOPT4 oligopeptide transporter *(OPT) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 61 720
No external refs found!