Spa_g38787 (TIFY2B, ZML1, GATA24)

Aliases : TIFY2B, ZML1, GATA24

Description : transcription factor *(C-GATA) & original description: none

Gene families : OG0001741 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001741_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Spa_g38787

Target	Alias	Description	ECC score	Gene Family Method
AT3G21175	TIFY2B, ZML1, GATA24	ZIM-like 1	0.02	OrthoFinder output from all 47 species
Aob_g04331	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g05519	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g00464	TIFY2B, ZML1, GATA24	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01009197001	ZIM, GATA25, TIFY1	RNA biosynthesis.transcriptional activation.C2C2...	0.03	OrthoFinder output from all 47 species
Len_g01691	ZML2, GATA28, TIFY2A	transcription factor *(C-GATA) & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g12603	ZML2, GATA28, TIFY2A	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g10099	No alias	transcription factor *(C-GATA) & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0004645	1,4-alpha-oligoglucan phosphorylase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA
BP	GO:0006508	proteolysis	IEP	HCCA
BP	GO:0006643	membrane lipid metabolic process	IEP	HCCA
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006664	glycolipid metabolic process	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	IEP	HCCA
BP	GO:0008152	metabolic process	IEP	HCCA
MF	GO:0008184	glycogen phosphorylase activity	IEP	HCCA
MF	GO:0008233	peptidase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
MF	GO:0008915	lipid-A-disaccharide synthase activity	IEP	HCCA
BP	GO:0009245	lipid A biosynthetic process	IEP	HCCA
BP	GO:0009247	glycolipid biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0016051	carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
BP	GO:0016579	protein deubiquitination	IEP	HCCA
MF	GO:0016757	glycosyltransferase activity	IEP	HCCA
MF	GO:0016758	hexosyltransferase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
CC	GO:0030117	membrane coat	IEP	HCCA
CC	GO:0030120	vesicle coat	IEP	HCCA
CC	GO:0030127	COPII vesicle coat	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0046467	membrane lipid biosynthetic process	IEP	HCCA
BP	GO:0046493	lipid A metabolic process	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0070646	protein modification by small protein removal	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
BP	GO:0071704	organic substance metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	HCCA
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	HCCA
BP	GO:1903509	liposaccharide metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR010399	Tify_dom	127	159
IPR010402	CCT_domain	193	235
IPR000679	Znf_GATA	269	305

External Links

No external refs found!

Spa_g38787 (TIFY2B, ZML1, GATA24)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation