1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g38972

Spa_g38972 (CH-CPN60A, CPN60A, SLP)


Aliases : CH-CPN60A, CPN60A, SLP

Description : chaperone *(Hsp60) & original description: none


Gene families : OG0000688 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000688_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g38972

Target Alias Description ECC score Gene Family Method Actions
AT5G18820 EMB3007 TCP-1/cpn60 chaperonin family protein 0.03 OrthoFinder output from all 47 species
Aev_g10192 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01271.t1 Aspi01Gene01271 chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44426.t1 CPN60B, LEN1,... chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0018.g014863 CH-CPN60A, CPN60A, SLP chaperone *(Hsp60) & original description: CDS=124-1707 0.04 OrthoFinder output from all 47 species
Ceric.10G077900.1 CH-CPN60A,... chaperone *(Hsp60) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.21G040000.1 Ceric.21G040000 chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.32G022500.1 CPN60B, LEN1,... chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.34G041900.1 CPN60B, LEN1,... chaperone *(Hsp60) & original description:... 0.07 OrthoFinder output from all 47 species
Cre04.g231222 CH-CPN60A, CPN60A, SLP External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
Cre07.g339150 No alias External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
GSVIVT01012098001 EMB3007 External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
LOC_Os12g17910.1 CH-CPN60A,... subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species
Len_g59695 CPN60B, LEN1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_97627g0010 No alias Chaperonin 60 subunit beta 2, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ore_g08643 No alias chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g068730.3.1 EMB3007, Solyc02g068730 subunit alpha of Cpn60 chaperonin complex. component... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 81 584
No external refs found!