Aliases : DND2, CNGC4, HLM1, ATCNGC4
Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none
Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00177p00063110 | DND1, ATCNGC2,... | Solute transport.channels.VIC superfamily.cyclic... | 0.04 | OrthoFinder output from all 47 species | |
| AT2G24610 | ATCNGC14, CNGC14 | cyclic nucleotide-gated channel 14 | 0.02 | OrthoFinder output from all 47 species | |
| AT5G15410 | DND1, ATCNGC2, CNGC2 | Cyclic nucleotide-regulated ion channel family protein | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24844 | ATCNGC20, CNGC20, CNBT1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g05216 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dac_g37579 | DND1, ATCNGC2, CNGC2 | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01014442001 | DND2, CNGC4,... | Solute transport.channels.VIC superfamily.cyclic... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01015970001 | ATCNGC8, CNGC8 | Solute transport.channels.VIC superfamily.cyclic... | 0.07 | OrthoFinder output from all 47 species | |
| GSVIVT01033170001 | ATCNGC14, CNGC14 | Solute transport.channels.VIC superfamily.cyclic... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g17251 | DND1, ATCNGC2, CNGC2 | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Sam_g30209 | No alias | cyclic nucleotide-gated cation channel *(CNGC) &... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g04129 | DND1, ATCNGC2, CNGC2 | temperature sensor protein *(CNGC2) & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| BP | GO:0006259 | DNA metabolic process | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| BP | GO:0009056 | catabolic process | IEP | HCCA |
| BP | GO:0009057 | macromolecule catabolic process | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044248 | cellular catabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| BP | GO:1901575 | organic substance catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000595 | cNMP-bd_dom | 140 | 227 |
| No external refs found! |
