1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g39811

Spa_g39811 (DND1, ATCNGC2, CNGC2)


Aliases : DND1, ATCNGC2, CNGC2

Description : cyclic nucleotide-gated cation channel *(CNGC) & original description: none


Gene families : OG0000170 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000170_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39811

Target Alias Description ECC score Gene Family Method Actions
AT2G46430 ATCNGC3, CNGC3, CNGC3.C cyclic nucleotide gated channel 3 0.02 OrthoFinder output from all 47 species
Dcu_g26407 DND1, ATCNGC2, CNGC2 temperature sensor protein *(CNGC2) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01029407001 ATCNGC20, CNGC20, CNBT1 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
GSVIVT01032502001 CNGC18, ATCNGC18 Solute transport.channels.VIC superfamily.cyclic... 0.03 OrthoFinder output from all 47 species
Lfl_g07966 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Lfl_g30559 DND2, CNGC4,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10425832g0010 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel (CNGC) 0.03 OrthoFinder output from all 47 species
MA_10431327g0010 DND1, ATCNGC2, CNGC2 Cyclic nucleotide-gated ion channel 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g14154 CNGC15, ATCNGC15 cyclic nucleotide-gated cation channel *(CNGC) &... 0.03 OrthoFinder output from all 47 species
Ppi_g06447 CNGC7, ATCNGC7 cyclic nucleotide-gated cation channel *(CNGC) &... 0.02 OrthoFinder output from all 47 species
Solyc11g069580.2.1 CNGC15,... cyclic nucleotide-gated cation channel (CNGC) 0.05 OrthoFinder output from all 47 species
Solyc12g010010.2.1 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species
Zm00001e006772_P003 CNGC5, ATCNGC5,... cyclic nucleotide-gated cation channel (CNGC) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005216 monoatomic ion channel activity IEA Interproscan
BP GO:0006811 monoatomic ion transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005821 Ion_trans_dom 119 432
IPR000595 cNMP-bd_dom 526 612
No external refs found!