Spa_g39927


Description : not classified & original description: none


Gene families : OG0005050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g39927

Target Alias Description ECC score Gene Family Method Actions
Adi_g055041 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g26111 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0078.g038252 No alias not classified & original description: CDS=1-1404 0.03 OrthoFinder output from all 47 species
LOC_Os11g18880.1 LOC_Os11g18880 Plant UBX domain-containing protein 11 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g20723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10436337g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sam_g14768 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo440879 No alias Plant UBX domain-containing protein 11 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
CC GO:0000814 ESCRT II complex IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0071985 multivesicular body sorting pathway IEP HCCA
InterPro domains Description Start Stop
IPR001012 UBX_dom 342 416
No external refs found!