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  5. Spa_g40873

Spa_g40873


Description : not classified & original description: none


Gene families : OG0001845 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001845_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g40873

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00092p00074340 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G67590 No alias Remorin family protein 0.02 OrthoFinder output from all 47 species
Ala_g26838 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Als_g30403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19734 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05715 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G081600.1 Ceric.04G081600 not classified & original description: pacid=50632175... 0.04 OrthoFinder output from all 47 species
Dac_g02817 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g15655 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g04838 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g02889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010242001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_00647 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g41940.1 LOC_Os12g41940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp1g28990.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp2g17160.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g11066 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08078 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0178.g024675 No alias not classified & original description: CDS=2620-4236 0.05 OrthoFinder output from all 47 species
Zm00001e025360_P003 Zm00001e025360 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 356 459
No external refs found!