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  4. Sequence
  5. Spa_g41694

Spa_g41694


Description : not classified & original description: none


Gene families : OG0000143 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000143_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g41694
Cluster HCCA: Cluster_64

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g31928 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g36969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31132 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cre15.g634750 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g29952 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g43811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17287 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01003141001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01020560001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01036397001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g68650.1 LOC_Os01g68650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g09336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_132127g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_41471g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g09998 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35478 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41587 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0106.g020224 No alias not classified & original description: CDS=806-2086 0.03 OrthoFinder output from all 47 species
Sam_g40584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc06g005480.3.1 Solyc06g005480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019800_P002 Zm00001e019800 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 115 322
No external refs found!