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  5. Spa_g42082

Spa_g42082


Description : ubiquitin adaptor protein *(TOL) & original description: none


Gene families : OG0000393 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000393_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42082

Target Alias Description ECC score Gene Family Method Actions
Adi_g055239 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12622 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene53703.t1 Aspi01Gene53703 ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G086300.1 Ceric.02G086300 ubiquitin adaptor protein *(TOL) & original description:... 0.03 OrthoFinder output from all 47 species
Dcu_g06412 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01014122001 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 OrthoFinder output from all 47 species
Gb_11104 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Gb_13955 No alias TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g61030.1 LOC_Os01g61030 TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
LOC_Os11g09329.1 LOC_Os11g09329 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species
Len_g05274 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g27437 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.04 OrthoFinder output from all 47 species
MA_62715g0010 No alias TOM endomembrane trafficking associated protein 0.04 OrthoFinder output from all 47 species
Msp_g07938 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15383 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007586 No alias ubiquitin adaptor protein *(TOL) & original description:... 0.02 OrthoFinder output from all 47 species
Sam_g15243 No alias ubiquitin adaptor protein *(TOL) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g097070.3.1 Solyc03g097070 TOM endomembrane trafficking associated protein 0.02 OrthoFinder output from all 47 species
Zm00001e019421_P001 Zm00001e019421 TOM endomembrane trafficking associated protein 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035091 phosphatidylinositol binding IEA Interproscan
MF GO:0043130 ubiquitin binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006914 autophagy IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
MF GO:0019786 Atg8-specific peptidase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002014 VHS_dom 47 192
No external refs found!