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  5. Spa_g42473

Spa_g42473


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g42473

Target Alias Description ECC score Gene Family Method Actions
Aev_g13651 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g11518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g33844 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g36503 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18255 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g26559 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene24271.t1 Aspi01Gene24271 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48128.t1 Aspi01Gene48128 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0014.g013569 No alias not classified & original description: CDS=1-2385 0.06 OrthoFinder output from all 47 species
Azfi_s0126.g048645 No alias not classified & original description: CDS=1-2262 0.05 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.06 OrthoFinder output from all 47 species
Azfi_s1721.g106134 CRR22 not classified & original description: CDS=1-1431 0.06 OrthoFinder output from all 47 species
Ceric.10G014900.1 Ceric.10G014900 not classified & original description: pacid=50613343... 0.03 OrthoFinder output from all 47 species
Ceric.22G077500.1 Ceric.22G077500 not classified & original description: pacid=50615168... 0.06 OrthoFinder output from all 47 species
Ceric.26G035200.1 Ceric.26G035200 not classified & original description: pacid=50599772... 0.03 OrthoFinder output from all 47 species
Dcu_g08605 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47902 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
GSVIVT01024606001 No alias Pentatricopeptide repeat-containing protein At4g39530... 0.07 OrthoFinder output from all 47 species
GSVIVT01031849001 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.05 OrthoFinder output from all 47 species
Gb_27291 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_31457 EMB2261 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
LOC_Os11g17530.2 LOC_Os11g17530 Pentatricopeptide repeat-containing protein At2g37320... 0.04 OrthoFinder output from all 47 species
Len_g04340 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17127 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05656 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g05729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07093 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07580 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36261 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_68580g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Msp_g28215 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g28794 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42789 DOT4 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g43428 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g05484 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08399 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g16042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g16805 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20126 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g27842 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g27960 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g38650 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g41060 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g16101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30637 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g58117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g03859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14924 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16146 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo106861 OTP82 Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Smo11063 REME1 Pentatricopeptide repeat-containing protein At2g34400... 0.04 OrthoFinder output from all 47 species
Smo30095 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Smo70183 OTP84 Pentatricopeptide repeat-containing protein At1g08070,... 0.03 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.06 OrthoFinder output from all 47 species
Spa_g25191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g01122 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23111 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000424 Primosome_PriB/ssb 130 224
No external refs found!