Spa_g45297


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45297

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.02 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g025356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036772 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053713 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067932 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g100622 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15138 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g16783 DOT4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g16840 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g20647 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g21668 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24375 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06360 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06580 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g06770 OTP86 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15782 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16177 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g18863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18971 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19094 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19105 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g26581 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g27639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g29010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30196 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g48598 EMB2261 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g54729 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g55180 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g58396 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g59203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g33568 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68130 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0254.g060431 No alias not classified & original description: CDS=1-2856 0.04 OrthoFinder output from all 47 species
Cba_g07505 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29852 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G124700.1 Ceric.01G124700 not classified & original description: pacid=50591887... 0.06 OrthoFinder output from all 47 species
Ceric.22G009800.1 Ceric.22G009800 not classified & original description: pacid=50615356... 0.05 OrthoFinder output from all 47 species
Ceric.22G034400.1 Ceric.22G034400 not classified & original description: pacid=50613809... 0.04 OrthoFinder output from all 47 species
Ceric.24G028500.1 Ceric.24G028500 not classified & original description: pacid=50629587... 0.05 OrthoFinder output from all 47 species
Dcu_g07066 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g13517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g35959 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g37178 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g47670 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g02336 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g03365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g17642 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18062 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24793 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g28401 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g36054 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g46474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46551 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dde_g51283 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.05 OrthoFinder output from all 47 species
LOC_Os09g39970.1 LOC_Os09g39970 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34720.1 LOI1, MEF11,... Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Len_g02780 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04137 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g04353 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g05444 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g08595 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g15365 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17372 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17539 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17561 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17783 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18991 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g20486 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20943 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23070 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25856 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g25972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g26297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26564 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g30737 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54673 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54969 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_138676g0010 EMB2261 RNA editing factor (ECD1) 0.02 OrthoFinder output from all 47 species
MA_34492g0020 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Msp_g07993 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g12985 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14364 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17747 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22512 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27928 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g28496 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g29683 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34496 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g45693 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46091 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06220 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06328 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g06820 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g13749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15421 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g19764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22679 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38344 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g41047 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g01771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15676 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g41882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43235 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13541 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g20548 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g03223 OTP84 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g10238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g53959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56822 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59327 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011577 No alias not classified & original description: CDS=124-1962 0.04 OrthoFinder output from all 47 species
Sam_g04996 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11266 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34612 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40709 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g43221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g02061 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g17205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21662 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22684 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23976 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g24976 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g39514 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45601 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g50886 CRR22 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g56737 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04672 SLO1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g13689 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20412 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24133 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g26856 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44634 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e029819_P003 CRR22, Zm00001e029819 RNA editing factor (CRR22) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 98 120
IPR002885 Pentatricopeptide_repeat 200 223
IPR002885 Pentatricopeptide_repeat 432 462
IPR002885 Pentatricopeptide_repeat 302 324
IPR002885 Pentatricopeptide_repeat 327 374
IPR002885 Pentatricopeptide_repeat 226 272
IPR002885 Pentatricopeptide_repeat 22 68
IPR002885 Pentatricopeptide_repeat 123 170
No external refs found!