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  5. Spa_g45601

Spa_g45601


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g45601
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Adi_g016117 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021159 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g025630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g033689 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g041176 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g043109 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g049842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056891 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g060245 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g066744 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g067906 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g081561 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g082818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g098198 SLO1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101155 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101179 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g111634 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117068 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g06657 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09204 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42949 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11484 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g17517 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g20209 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g23769 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24626 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g34486 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g35872 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38081 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g38435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g15922 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g05931 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04156 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene03740.t1 Aspi01Gene03740 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene04901.t1 Aspi01Gene04901 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28051.t1 Aspi01Gene28051 cofactor of plastid-encoded RNA polymerase *(TAC9) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene30517.t1 CRR22, Aspi01Gene30517 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31476.t1 Aspi01Gene31476 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene35079.t1 Aspi01Gene35079 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0048.g030454 No alias not classified & original description: CDS=2-2074 0.05 OrthoFinder output from all 47 species
Cba_g04086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g13545 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g75809 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g04704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18424 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19488 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g19560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g21390 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g21408 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g30402 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.03 OrthoFinder output from all 47 species
Len_g38569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04437 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g22834 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28761 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g48606 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g08010 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g08794 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g30564 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g02370 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07471 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37271 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03294 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12216 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13457 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03353 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27694 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06417 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g08791 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09778 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15635 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40202 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43570 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g44704 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53363 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59316 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g16542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21372 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g32996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g45297 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05207 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07082 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35364 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35624 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e014549_P001 CRR22, Zm00001e014549 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006284 base-excision repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 161 208
No external refs found!