1. Home
  2. Species
  3. Stenochlaena palustris
  4. Sequence
  5. Spa_g46052

Spa_g46052


Description : 2S globulin seed storage protein & original description: none


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g46052
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271140 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g051500 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g060075 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g00816 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03907 No alias 2S globulin seed storage protein & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g26521 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36197 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g50715 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16620 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g16625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64637 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene01958.t1 Aspi01Gene01958 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05703.t1 Aspi01Gene05703 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene14065.t1 Aspi01Gene14065 2S globulin seed storage protein & original description: none 0.08 OrthoFinder output from all 47 species
Aspi01Gene35024.t1 Aspi01Gene35024 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55008.t1 Aspi01Gene55008 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene55009.t1 Aspi01Gene55009 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68849.t1 Aspi01Gene68849 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene68854.t1 Aspi01Gene68854 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0431.g069367 No alias 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Cba_g09475 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G066400.1 Ceric.14G066400 2S globulin seed storage protein & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G066600.1 Ceric.14G066600 2S globulin seed storage protein & original description:... 0.05 OrthoFinder output from all 47 species
Dac_g09810 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28835 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34761 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g47659 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14449 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Gb_07285 No alias no description available(sp|q7m443|chit2_tulsb : 215.0) 0.03 OrthoFinder output from all 47 species
Gb_07286 No alias no description available(sp|q9slp4|chit1_tulsb : 171.0) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57390.1 LOC_Os01g57390 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g57400.1 LOC_Os01g57400 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28050.1 LOC_Os10g28050 no description available(sp|q7m443|chit2_tulsb : 285.0) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28080.1 LOC_Os10g28080 no description available(sp|q9slp4|chit1_tulsb : 266.0) 0.02 OrthoFinder output from all 47 species
Len_g30408 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Len_g46226 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Len_g51292 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g12684 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g29733 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30589 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g03759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22062 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35593 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49402 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02574 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g18287 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55644 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61907 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0126.g021725 No alias 2S globulin seed storage protein & original description:... 0.03 OrthoFinder output from all 47 species
Smo411181 No alias Chitinase 1 OS=Tulipa bakeri 0.02 OrthoFinder output from all 47 species
Spa_g05409 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g16342 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004771_P001 Zm00001e004771 no description available(sp|q7m443|chit2_tulsb : 319.0) 0.02 OrthoFinder output from all 47 species
Zm00001e015464_P001 Zm00001e015464 no description available(sp|q7m443|chit2_tulsb : 269.0) 0.03 OrthoFinder output from all 47 species
Zm00001e021310_P001 Zm00001e021310 no description available(sp|q7m443|chit2_tulsb : 281.0) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 173 305
IPR018392 LysM_dom 53 95
No external refs found!