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  5. Spa_g46290

Spa_g46290


Description : not classified & original description: none


Gene families : OG0000584 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000584_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g46290
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00189750 evm_27.TU.AmTr_v1... BTB/POZ domain-containing protein At1g03010... 0.02 OrthoFinder output from all 47 species
Adi_g056705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14288 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12703 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene43240.t1 Aspi01Gene43240 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.02 OrthoFinder output from all 47 species
Aspi01Gene62872.t1 Aspi01Gene62872 substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.03 OrthoFinder output from all 47 species
Cba_g05247 No alias substrate adaptor *(NRL) of CUL3-based E3 ubiquitin... 0.05 OrthoFinder output from all 47 species
Ceric.09G078000.1 Ceric.09G078000 not classified & original description: pacid=50587188... 0.03 OrthoFinder output from all 47 species
Ceric.25G051000.1 Ceric.25G051000 not classified & original description: pacid=50594195... 0.03 OrthoFinder output from all 47 species
Ceric.25G065200.1 Ceric.25G065200 not classified & original description: pacid=50593433... 0.03 OrthoFinder output from all 47 species
Dac_g07287 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Dac_g08261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g24164 RPT3, NPH3, JK218 not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g22600.1 LOC_Os03g22600 BTB/POZ domain-containing protein At1g03010... 0.04 OrthoFinder output from all 47 species
LOC_Os12g02540.1 LOC_Os12g02540 BTB/POZ domain-containing protein At3g08570... 0.04 OrthoFinder output from all 47 species
Len_g57120 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10429476g0010 RPT2 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Nbi_g12476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03886 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquitin... 0.04 OrthoFinder output from all 47 species
Ppi_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0175.g024554 No alias not classified & original description: CDS=1-1890 0.02 OrthoFinder output from all 47 species
Solyc02g064720.3.1 Solyc02g064720 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g092600.3.1 Solyc02g092600 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g092610.3.1 Solyc02g092610 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc02g092620.3.1 Solyc02g092620 BTB/POZ domain-containing protein SR1IP1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g41434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g01113 No alias substrate adaptor *(NCL/NCH) of CUL3-BTB E3 ubiquiTin... 0.03 OrthoFinder output from all 47 species
Tin_g14694 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 217 486
IPR000210 BTB/POZ_dom 45 132
No external refs found!