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  5. Spa_g46968

Spa_g46968 (LBD15, ASL11)


Aliases : LBD15, ASL11

Description : AS2/LOB-type transcription factor & original description: none


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g46968
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00076p00127530 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AT1G06280 LBD2 LOB domain-containing protein 2 0.03 OrthoFinder output from all 47 species
AT1G07900 LBD1 LOB domain-containing protein 1 0.03 OrthoFinder output from all 47 species
AT1G65620 AS2 Lateral organ boundaries (LOB) domain family protein 0.03 OrthoFinder output from all 47 species
AT2G30130 LBD12, ASL5, PCK1 Lateral organ boundaries (LOB) domain family protein 0.02 OrthoFinder output from all 47 species
AT2G30340 LBD13 LOB domain-containing protein 13 0.03 OrthoFinder output from all 47 species
AT2G42430 LBD16, ASL18 lateral organ boundaries-domain 16 0.02 OrthoFinder output from all 47 species
AT2G45410 LBD19 LOB domain-containing protein 19 0.03 OrthoFinder output from all 47 species
AT3G03760 LBD20 LOB domain-containing protein 20 0.02 OrthoFinder output from all 47 species
Aev_g16089 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27571 LBD4 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Als_g10153 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05610 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21579 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19447 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g64401 LBD20 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g70670 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25201.t1 LBD25, Aspi01Gene25201 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25203.t1 LBD25, Aspi01Gene25203 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0225.g058902 LBD4 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0305.g063899 LBD15, ASL11 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.01G082500.1 LOB, Ceric.01G082500 AS2/LOB-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.02G060200.1 LBD15, ASL11,... AS2/LOB-type transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g25272 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g32484 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29091 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01010625001 LBD23 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.04 OrthoFinder output from all 47 species
GSVIVT01016326001 LBD11 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.02 OrthoFinder output from all 47 species
GSVIVT01020353001 LBD4 RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
Gb_14010 LBD20 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_16914 LBD1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_22180 LBD11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_29853 LBD4 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_39343 LBD20 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
LOC_Os02g57490.1 LBD16, ASL18,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
MA_10434193g0010 LBD1 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_161608g0010 LOB transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_16891g0010 LOB transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_66501g0010 LBD12, ASL5, PCK1 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Msp_g03461 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43952 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57178 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g19686 LBD4 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g33439 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g60181 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g050950.3.1 LBD12, ASL5,... transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Solyc11g072470.3.1 LBD1, Solyc11g072470 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Tin_g03811 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 2 56
No external refs found!