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  5. Spa_g47379

Spa_g47379


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0001997 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001997_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47379
Cluster HCCA: Cluster_91

Target Alias Description ECC score Gene Family Method Actions
Aev_g19383 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.27G002300.1 Ceric.27G002300 EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g10690 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g04824 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g09171 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g29490 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g12140.1 LOC_Os03g12140 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os07g32600.1 LOC_Os07g32600 Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g02853 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Mp1g11180.1 No alias Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species
Msp_g13012 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g16031 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26120 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g19855 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g007910.3.1 Solyc04g007910 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc08g005000.4.1 Solyc08g005000 Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Spa_g07129 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e038695_P001 Zm00001e038695 Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 33 346
IPR012946 X8 371 441
No external refs found!