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  5. Spa_g47427

Spa_g47427


Description : not classified & original description: none


Gene families : OG0000526 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000526_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47427

Target Alias Description ECC score Gene Family Method Actions
AT3G48940 No alias Remorin family protein 0.04 OrthoFinder output from all 47 species
AT3G61260 No alias Remorin family protein 0.02 OrthoFinder output from all 47 species
Adi_g114605 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04326 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g25241 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02255 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06893 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51160 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g50861 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g70234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s2817.g113172 No alias not classified & original description: CDS=1-291 0.02 OrthoFinder output from all 47 species
Ceric.04G101900.1 Ceric.04G101900 not classified & original description: pacid=50631891... 0.04 OrthoFinder output from all 47 species
Ceric.06G045700.1 Ceric.06G045700 not classified & original description: pacid=50619672... 0.03 OrthoFinder output from all 47 species
Ceric.20G080000.1 Ceric.20G080000 not classified & original description: pacid=50567377... 0.04 OrthoFinder output from all 47 species
Ceric.35G046700.1 Ceric.35G046700 not classified & original description: pacid=50581722... 0.03 OrthoFinder output from all 47 species
Dac_g15637 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g02391 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07290 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g00217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019785001 No alias Remorin OS=Solanum tuberosum 0.04 OrthoFinder output from all 47 species
GSVIVT01026869001 No alias Uncharacterized protein At3g61260 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g23734 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57392 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g57393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g20891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05160 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16515 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g35103 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g41173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15851 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g25809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06625 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g06776 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005937 No alias not classified & original description: CDS=1-372 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016629 No alias not classified & original description: CDS=385-969 0.03 OrthoFinder output from all 47 species
Sam_g08273 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g48237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc05g048820.3.1 Solyc05g048820 Remorin OS=Solanum tuberosum (sp|p93788|remo_soltu : 94.0) 0.03 OrthoFinder output from all 47 species
Spa_g00381 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g38180 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46489 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Zm00001e015240_P001 Zm00001e015240 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR005516 Remorin_C 147 251
No external refs found!