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  5. Spa_g47451

Spa_g47451


Description : CMF transcription factor & original description: none


Gene families : OG0001051 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001051_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g47451
Cluster HCCA: Cluster_66

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.06 OrthoFinder output from all 47 species
Adi_g021795 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g105671 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g21583 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24424 No alias CMF transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g20729 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G070500.1 Ceric.08G070500 BBX class-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g12836 No alias BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20875 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g50310.1 LOC_Os03g50310 transcription factor (BBX-CO) 0.02 OrthoFinder output from all 47 species
Len_g28862 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g06124 No alias CMF transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g37830 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g47217 No alias CMF transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g24194 No alias CMF transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g14853 No alias CMF transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g19039 No alias BBX class-III transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g60427 No alias BBX class-III transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007602 No alias not classified & original description: CDS=193-1710 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023452 No alias BBX class-III transcription factor & original... 0.04 OrthoFinder output from all 47 species
Sam_g34850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g20168 No alias BBX class-III transcription factor & original description: none 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR010402 CCT_domain 531 573
IPR000315 Znf_B-box 32 74
No external refs found!