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  5. Spa_g48246

Spa_g48246


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48246

Target Alias Description ECC score Gene Family Method Actions
Adi_g043970 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g079009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g05790 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29638 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31002 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37343 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35639 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre16.g649650 No alias No description available 0.02 OrthoFinder output from all 47 species
Ehy_g00289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009157001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_22308 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_24984 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28740.1 LOC_Os05g28740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os12g36640.1 LOC_Os12g36640 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g16126 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g23420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24168 RD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g25399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10303844g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g01773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g45329 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g59165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g109710.3.1 RD2, Solyc01g109710 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc02g079410.2.1 Solyc02g079410 Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc05g054270.2.1 Solyc05g054270 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc10g086670.2.1 Solyc10g086670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc12g099520.3.1 Solyc12g099520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g22810 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04358 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 9 162
No external refs found!