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  5. Spa_g48499

Spa_g48499 (SPT)


Aliases : SPT

Description : bHLH-type transcription factor & original description: none


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48499
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT2G43140 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
Aob_g31589 RSL4 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20709 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28112.t1 PIF3, POC1,... bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68995 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51679 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43893 HEC1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Mp3g17930.1 ATRSL1, RSL1 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Pir_g20190 BPEp, ZCW32, BPE, BPEub regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ppi_g29684 HEC2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000921_P005 Zm00001e000921 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e005554_P001 Zm00001e005554 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e011410_P001 Zm00001e011410 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e015045_P002 Zm00001e015045 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e015610_P001 RHD6, Zm00001e015610 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e017430_P001 PIF3, POC1,... transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0044183 protein folding chaperone IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140662 ATP-dependent protein folding chaperone IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 316 360
No external refs found!