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  5. Spa_g48523

Spa_g48523 (PGP13)


Aliases : PGP13

Description : subfamily ABCB transporter & original description: none


Gene families : OG0000048 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48523
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT1G02530 PGP12 P-glycoprotein 12 0.02 OrthoFinder output from all 47 species
Adi_g021749 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g113233 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g22258 PGP2 subfamily ABCB transporter & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.36G025500.1 PGP2, Ceric.36G025500 subfamily ABCB transporter & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g46023 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g52100 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g17218 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21852 ABCB19,... subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431815g0020 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species
Mp2g02920.1 ABCB19,... auxin efflux transporter (ABCB19). subfamily ABCB transporter 0.02 OrthoFinder output from all 47 species
Nbi_g02480 PGP11 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03862 ABCB19,... subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g42482 PGP13 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07333 ATPGP4, PGP4, ABCB4, MDR4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo139408 PGP20 Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Spa_g09413 PGP2 subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g21974 ABCB19,... subfamily ABCB transporter & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g47519 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56665 ABCB19,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06699 PGP2 subfamily ABCB transporter & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31718 PGP2 subfamily ABCB transporter & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008749_P001 ABCB19,... subfamily ABCB transporter 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011527 ABC1_TM_dom 760 1033
IPR011527 ABC1_TM_dom 112 384
IPR003439 ABC_transporter-like_ATP-bd 454 603
IPR003439 ABC_transporter-like_ATP-bd 1101 1249
No external refs found!