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  5. Spa_g48860

Spa_g48860


Description : solute transporter *(AAAP) & original description: none


Gene families : OG0000278 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000278_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48860

Target Alias Description ECC score Gene Family Method Actions
Aev_g10647 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07502 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0120.g046809 No alias solute transporter *(AAAP) & original description: CDS=42-1736 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058427 No alias solute transporter *(AAAP) & original description: CDS=1-1575 0.02 OrthoFinder output from all 47 species
Ceric.04G003800.1 Ceric.04G003800 solute transporter *(AAAP) & original description:... 0.01 OrthoFinder output from all 47 species
Ceric.23G049700.1 Ceric.23G049700 solute transporter *(AAAP) & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g18151 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31336 No alias solute transporter *(AAAP) & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g11697 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016234001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01019976001 No alias Solute transport.carrier-mediated transport.APC... 0.04 OrthoFinder output from all 47 species
GSVIVT01020259001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01031484001 No alias Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
GSVIVT01034218001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g40410.1 LOC_Os01g40410 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Len_g10361 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g35300 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_60453g0010 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
MA_670490g0010 No alias Amino acid transporter AVT1C OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g13500.1 No alias solute transporter (AAAP) 0.03 OrthoFinder output from all 47 species
Mp3g14120.1 No alias solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Ore_g15845 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42250 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16581 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32905 No alias solute transporter *(AAAP) & original description: none 0.02 OrthoFinder output from all 47 species
Smo438611 No alias Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
Solyc03g013440.4.1 Solyc03g013440 solute transporter (AAAP) 0.02 OrthoFinder output from all 47 species
Solyc09g098380.3.1 Solyc09g098380 solute transporter (AAAP) 0.04 OrthoFinder output from all 47 species
Spa_g21494 No alias solute transporter *(AAAP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008656_P002 Zm00001e008656 solute transporter (AAAP) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 26 379
No external refs found!