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  5. Spa_g48898

Spa_g48898


Description : not classified & original description: none


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Spa_g48898

Target Alias Description ECC score Gene Family Method Actions
AT3G18215 No alias Protein of unknown function, DUF599 0.03 OrthoFinder output from all 47 species
AT5G10580 No alias Protein of unknown function, DUF599 0.03 OrthoFinder output from all 47 species
AT5G24790 No alias Protein of unknown function, DUF599 0.02 OrthoFinder output from all 47 species
Ala_g38181 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13364 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25351.t1 Aspi01Gene25351 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene37432.t1 Aspi01Gene37432 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene56804.t1 Aspi01Gene56804 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15733 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34756 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01034340001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01034341001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_09350 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_09351 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40940.1 LOC_Os08g40940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g08550 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28293 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_26720g0010 No alias no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_788969g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g20992 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g02713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g47908 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02777 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g46513 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004185 No alias not classified & original description: CDS=213-944 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0135.g022373 No alias not classified & original description: CDS=333-1151 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0141.g022761 No alias not classified & original description: CDS=253-1047 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023071 No alias not classified & original description: CDS=695-1528 0.02 OrthoFinder output from all 47 species
Solyc02g077550.4.1 Solyc02g077550 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Spa_g00279 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e003584_P002 Zm00001e003584 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e034570_P003 Zm00001e034570 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 15 208
No external refs found!